MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Neisseria sp.
19428wB4_WF04
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 263
bases: 2,606,596 bps
CDS: 2,317
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 47
misc RNA:
Total features: 2,368
Total number of protein coding genes annotated/found:
2,317
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5039|JADGLG010000002.1
SEQF5039_01013
Genome Viewer
NA
AA
501/167
106028-105528
hypothetical protein
SEQF5039|JADGLG010000002.1
SEQF5039_01012
Genome Viewer
NA
AA
492/164
104891-104400
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00547
Genome Viewer
NA
AA
1524/508
103884-105407
Succinyl-CoA:acetate CoA-transferase
SEQF5039|JADGLG010000002.1
SEQF5039_01011
Genome Viewer
NA
AA
567/189
103470-104036
Outer membrane protein H.8
SEQF5039|JADGLG010000002.1
SEQF5039_01010
Genome Viewer
NA
AA
192/64
103275-103084
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00546
Genome Viewer
NA
AA
1296/432
102205-103500
tRNA-dihydrouridine(16) synthase
SEQF5039|JADGLG010000001.1
SEQF5039_00545
Genome Viewer
NA
AA
885/295
101030-101914
Ribokinase
SEQF5039|JADGLG010000002.1
SEQF5039_01009
Genome Viewer
NA
AA
1206/402
100841-102046
Tryptophan synthase beta chain
SEQF5039|JADGLG010000003.1
SEQF5039_01357
Genome Viewer
NA
AA
378/126
100069-99692
IS1595 family transposase ISNwa2
SEQF5039|JADGLG010000001.1
SEQF5039_00544
Genome Viewer
NA
AA
1347/449
99687-101033
D-xylose-proton symporter
SEQF5039|JADGLG010000001.1
SEQF5039_00543
Genome Viewer
NA
AA
111/37
99615-99505
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00542
Genome Viewer
NA
AA
783/261
99210-98428
putative formate transporter 1
SEQF5039|JADGLG010000002.1
SEQF5039_01008
Genome Viewer
NA
AA
1551/517
99193-100743
L-threonine dehydratase biosynthetic IlvA
SEQF5039|JADGLG010000002.1
SEQF5039_01007
Genome Viewer
NA
AA
1215/405
98939-97725
D-alanyl-D-alanine carboxypeptidase DacC
SEQF5039|JADGLG010000003.1
SEQF5039_01356
Genome Viewer
NA
AA
198/66
98618-98815
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00541
Genome Viewer
NA
AA
480/160
98161-97682
2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase
SEQF5039|JADGLG010000001.1
SEQF5039_00540
Genome Viewer
NA
AA
666/222
97445-96780
Ribose-5-phosphate isomerase A
SEQF5039|JADGLG010000001.1
SEQF5039_00539
Genome Viewer
NA
AA
1194/398
96562-95369
Aspartate aminotransferase
SEQF5039|JADGLG010000002.1
SEQF5039_01006
Genome Viewer
NA
AA
1512/504
95873-97384
TPR repeat-containing protein
SEQF5039|JADGLG010000002.1
SEQF5039_01005
Genome Viewer
NA
AA
966/322
95715-94750
Ribosomal RNA large subunit methyltransferase K
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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